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Impact of Human Migrations on Diversity of Helicobacter pylori in Cambodia and New Caledonia.

Breurec Sebastien, Raymond Josette, Thiberge Jean-Michel, Hem Sopheak, Monchy Didier, Seck Abdoulaye, Dehoux Pierre, Garin Benoit, Dauga Catherine. 2013-01-28. .
ARTICLE, (2013-01-28 ) - PUBLISHEDVERSION - English (en-GB)

OPENACCESS - .
Audience : OTHER
HAL CCSD, Wiley
Subject
Cambodia, genomic diversity, Helicobacter pylori, human migrations, New Caledonia, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology
Domains
Santé, Biologie, Sciences du vivant
Description

International audience BACKGROUND: Helicobacter pylori is a major gastric bacterial pathogen, presumed to have established itself in the human stomach approximately 100,000 years ago. Helicobacter pylori co-evolved with its host, and human migrations shaped the expansion and the diversity of strains around the world. Here, we investigated the population structure and the genomic diversity of H. pylori in New Caledonia and Cambodia, where humans of different origins are living. METHODS: Both multilocus sequence typing (MLST) and macro-array experiments were performed to assess polymorphism of housekeeping genes and to compare differences in gene contents among strains of H. pylori. RESULTS: The macro-array analysis based on variations of the flexible gene pools was consistent with the contribution of ancestral H. pylori populations to modern strains. Most of the CDS variably present encode proteins of unknown function, selfish DNA, and transposases. In New Caledonia-where humans are of several ethnic origins-strains belonged to four different genetic populations, reflecting the diversity of human populations. Melanesians and Polynesians were infected mainly by strains assigned to hspMaori, whereas Caucasians were infected by hspWAfrica, hpEurope, and hpNEAfrica strains. In contrast, strains from Khmer patients belonged to only two subpopulations: hspEAsia and hpEurope. In the two countries, both ancient and recent human migrations may have influenced the diversity of H. pylori. CONCLUSION: Our present results are consistent with the possibility of admixture of strains in multiethnic communities. This increases the global polymorphism of H. pylori without evidence of functional change or impact on fitness and virulence.

Keywords
Language
English (en-GB)
Creators
Breurec, Sebastien, Raymond, Josette, Thiberge, Jean-Michel, Hem, Sopheak, Monchy, Didier, Seck, Abdoulaye, Dehoux, Pierre, Garin, Benoit, Dauga, Catherine
Contributors
Institut Pasteur de Nouvelle-Calédonie ; Réseau International des Instituts Pasteur (RIIP), Institut Pasteur de Dakar ; Réseau International des Instituts Pasteur (RIIP), Pathogenèse de Helicobacter ; Institut Pasteur [Paris], Hôpital Cochin [AP-HP] ; Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Génotypage des Pathogènes et Santé Publique (Plate-forme) (PF8) ; Institut Pasteur [Paris], Institut Pasteur du Cambodge ; Réseau International des Instituts Pasteur (RIIP), Intégration et Analyse Génomique (Plate-Forme 4) (PF4) ; Institut Pasteur [Paris]
Sources
ISSN: 1083-4389, EISSN: 1523-5378, Helicobacter, https://hal-riip.archives-ouvertes.fr/pasteur-00782627, Helicobacter, Wiley, 2013, epub ahead of print. ⟨10.1111/hel.12037⟩
Relation
info:eu-repo/semantics/altIdentifier/doi/10.1111/hel.12037
info:eu-repo/semantics/altIdentifier/pmid/23350664
Coverage
Melanesia
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